STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OQO70062.1Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
OQO70063.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.948
OQO70064.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.936
BH747_07820
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.847
OQO71145.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.780
OQO71146.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.773
OQO69579.1
Cell surface protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.754
OQO69578.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.746
OQO70065.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.732
OQO68186.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
 
  0.666
OQO71315.1
Peptidase C39; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
   0.605
Your Current Organism:
Enterococcus villorum
NCBI taxonomy Id: 112904
Other names: ATCC 700913 [[Enterococcus porcinus]], CCM 4887, CCUG 45025, E. villorum, Enterococcus porcinus, Enterococcus porcinus Teixeira et al. 2001, Enterococcus villorum Vancanneyt et al. 2001, JCM 11557, LMG 12287, LMG:12287, NBRC 100699, strain 88-5474
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.