STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_00020COG4382 Mu-like prophage protein gp16. (178 aa)    
Predicted Functional Partners:
AJE_00015
Phage regulatory protein.
       0.782
AJE_00010
Hypothetical protein.
       0.773
AJE_00025
Hypothetical protein; COG1874 Beta-galactosidase.
       0.773
AJE_00030
COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family.
       0.647
AJE_00005
Hypothetical protein.
       0.566
AJE_13631
N-carbamoylputrescine amidase; COG0388 Predicted amidohydrolase.
   
    0.414
AJE_00035
Hypothetical protein.
  
    0.413
AJE_00045
Hypothetical protein; COG2801 Transposase and inactivated derivatives.
       0.412
AJE_00050
Hypothetical protein.
       0.410
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.