STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_00575Sensor histidine kinase; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain. (362 aa)    
Predicted Functional Partners:
AJE_00580
Response regulator in two-component regulatory system; COG3279 Response regulator of the LytR/AlgR family.
 0.981
AJE_05146
Alginate biosynthesis regulatory protein; COG3279 Response regulator of the LytR/AlgR family.
 0.926
AJE_11984
LytTR family two component transcriptional regulator; COG3279 Response regulator of the LytR/AlgR family.
 0.912
AJE_04270
Aerobic respiration control sensor protein ArcB; COG0642 Signal transduction histidine kinase.
 
    
 0.773
AJE_12069
Response regulator receiver domain-containing protein; COG3279 Response regulator of the LytR/AlgR family.
 
 0.771
AJE_13200
COG0642 Signal transduction histidine kinase.
 
   
 0.741
AJE_05151
Alginate biosynthesis protein; COG2972 Predicted signal transduction protein with a C-terminal ATPase domain.
 
  
 
0.594
AJE_11004
Type II secretory pathway ATPase PulE/Tfp pilus assembly pathway ATPase PilB; COG0784 FOG: CheY-like receiver.
  
 0.544
AJE_00570
COG4539 Predicted membrane protein.
       0.487
AJE_10999
Hpt sensor hybrid histidine kinase; COG2198 FOG: HPt domain.
   
 
 0.471
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.