STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_00645COG1639 Predicted signal transduction protein. (281 aa)    
Predicted Functional Partners:
AJE_04821
Diguanylate cyclase; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
  
  0.619
flgI
Flagellar basal body P-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.606
AJE_00650
Malate dehydrogenase; COG0281 Malic enzyme.
       0.603
flgH
Flagellar basal body L-ring protein; Assembles around the rod to form the L-ring and probably protects the motor/basal body from shearing forces during rotation.
 
     0.598
flgD
Flagellar basal body rod modification protein; Required for flagellar hook formation. May act as a scaffolding protein.
 
     0.587
AJE_13220
GGDEF domain-containing protein; COG3706 Response regulator containing a CheY-like receiver domain and a GGDEF domain.
 
   
  0.575
AJE_13200
COG0642 Signal transduction histidine kinase.
   
 0.557
AJE_03636
Flagellar biosynthesis; Involved in the assembly process of the P-ring formation. It may associate with FlgF on the rod constituting a structure essential for the P-ring assembly or may act as a modulator protein for the P- ring assembly; Belongs to the FlgA family.
 
     0.554
AJE_14210
Sensory box/GGDEF protein; COG2199 FOG: GGDEF domain.
 
   
  0.548
AJE_03576
COG1256 Flagellar hook-associated protein; Belongs to the flagella basal body rod proteins family.
 
     0.539
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.