STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_01129Hypothetical protein. (164 aa)    
Predicted Functional Partners:
AJE_01134
DNA polymerase subunit beta; COG1708 Predicted nucleotidyltransferases.
 
     0.952
AJE_06891
DNA polymerase, beta-like region; COG1708 Predicted nucleotidyltransferases.
 
     0.787
AJE_01139
YaeQ family protein; COG4681 Uncharacterized protein conserved in bacteria.
       0.503
AJE_01124
Hypothetical protein.
       0.447
AJE_07651
Hypothetical protein; COG3668 Plasmid stabilization system protein.
  
     0.414
AJE_06861
COG2929 Uncharacterized protein conserved in bacteria.
  
     0.409
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.