STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_01284COG1757 Na+/H+ antiporter. (493 aa)    
Predicted Functional Partners:
AJE_01289
COG0733 Na+-dependent transporters of the SNF family.
 
     0.788
AJE_01274
Hypothetical protein.
       0.609
pepN
COG0308 Aminopeptidase N.
       0.607
AJE_01796
Aminotransferase AlaT; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.578
AJE_09619
Class I/II aminotransferase; COG0436 Aspartate/tyrosine/aromatic aminotransferase.
   
    0.578
AJE_01294
COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
       0.443
AJE_10729
C4-dicarboxylate anaerobic carrier; COG1288 Predicted membrane protein.
 
     0.432
proQ
ProP expression regulator; RNA chaperone with significant RNA binding, RNA strand exchange and RNA duplexing activities; Belongs to the ProQ family.
  
    0.431
AJE_01309
COG1956 GAF domain-containing protein.
       0.426
AJE_01304
Hypothetical protein.
       0.415
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.