STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_01364Hypothetical protein. (204 aa)    
Predicted Functional Partners:
AJE_01369
Hypothetical protein; COG0086 DNA-directed RNA polymerase, beta' subunit/160 kD subunit.
       0.773
AJE_02671
Metallo-beta-lactamase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
  
  0.589
AJE_16789
Cysteine desulfurase, SufS subfamily protein; COG0520 Selenocysteine lyase.
  
  
  0.586
AJE_01374
COG4399 Uncharacterized protein conserved in bacteria.
       0.566
AJE_01359
Hypothetical protein.
       0.507
AJE_14390
Cellulose-binding family II protein.
  
     0.444
AJE_02746
COG3085 Uncharacterized protein conserved in bacteria.
  
     0.407
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.