STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_01686COG3203 Outer membrane protein (porin). (330 aa)    
Predicted Functional Partners:
AJE_16249
COG2853 Surface lipoprotein.
   
 
 0.800
AJE_01691
Sodium-dependent anion transporter; COG0471 Di- and tricarboxylate transporters.
       0.771
AJE_12945
Hypothetical protein.
  
 
   0.639
AJE_07895
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
   
 0.618
AJE_13110
DNA binding protein; COG1396 Predicted transcriptional regulators.
  
     0.614
AJE_01676
COG4191 Signal transduction histidine kinase regulating C4-dicarboxylate transport system.
 
     0.592
AJE_06426
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.552
AJE_07116
Putative two-component system sensor kinase.
  
     0.539
AJE_16779
Mn2+-dependent serine/threonine protein kinase.
  
     0.510
tolB
Translocation protein TolB; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
    
 
 0.500
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.