STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_02111EcoKI restriction-modification system protein HsdS; COG0732 Restriction endonuclease S subunits. (469 aa)    
Predicted Functional Partners:
AJE_02116
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.983
AJE_06526
COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.928
hsdR
COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
     0.893
AJE_06551
COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
   0.860
AJE_00435
COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.815
AJE_10443
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.803
AJE_02121
Filamentation induced by cAMP protein fic; Adenylyltransferase that mediates the addition of adenosine 5'-monophosphate (AMP) to specific residues of target proteins.
       0.777
AJE_08517
N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit.
 
 
 0.746
AJE_08822
Hypothetical protein; COG0827 Adenine-specific DNA methylase.
 
   0.713
AJE_08537
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
  
 0.706
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.