STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_02431COG0438 Glycosyltransferase. (390 aa)    
Predicted Functional Partners:
AJE_02421
COG0451 Nucleoside-diphosphate-sugar epimerases.
  
 
 0.884
AJE_02441
O-antigen translocase; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
  
 
  0.861
AJE_02456
Oxidoreductase family, NAD-binding Rossmann fold family protein; COG0673 Predicted dehydrogenases and related proteins.
  
  
 0.785
AJE_02446
DegT/DnrJ/EryC1/StrS family protein; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
  
    0.784
AJE_02451
WbbJ protein; COG0110 Acetyltransferase (isoleucine patch superfamily).
  
    0.778
AJE_02436
Putative B-band O-antigen polymerase.
       0.773
cpsB
COG0836 Mannose-1-phosphate guanylyltransferase; Belongs to the mannose-6-phosphate isomerase type 2 family.
  
 
 0.764
AJE_02461
UDP-glucose dehydrogenase; COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
  
 
  0.759
AJE_02886
COG2148 Sugar transferases involved in lipopolysaccharide synthesis.
 
 
 0.727
AJE_02466
Lipopolysaccharide biosynthesis protein.
  
 
  0.700
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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