STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_02526Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system. (83 aa)    
Predicted Functional Partners:
AJE_02521
COG1487 Predicted nucleic acid-binding protein, contains PIN domain.
 
     0.952
AJE_05421
Txe/YoeB family addiction module toxin; COG4115 Uncharacterized protein conserved in bacteria.
  
 
 0.549
AJE_17064
COG4115 Uncharacterized protein conserved in bacteria.
  
 
 0.549
AJE_05311
RelE; COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system.
   
 
 0.490
AJE_02531
Porin.
       0.461
AJE_02536
COG3135 Uncharacterized protein involved in benzoate metabolism.
       0.428
AJE_02541
Benzoate transporter; COG0477 Permeases of the major facilitator superfamily.
       0.428
AJE_08210
COG5499 Predicted transcription regulator containing HTH domain.
  
   
 0.424
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.