STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_03451FlaR protein (FlaR); COG3980 Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase. (341 aa)    
Predicted Functional Partners:
AJE_03456
COG2089 Sialic acid synthase.
 
 
 0.993
AJE_03446
Putative acylneuraminate cytidylyltransferase; COG1083 CMP-N-acetylneuraminic acid synthetase.
   
 0.986
AJE_03461
Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
 
 
 0.977
AJE_03441
Putative DegT/DnrJ/EryC1/StrS aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.969
AJE_03436
Polysaccharide biosynthesis protein; COG1086 Predicted nucleoside-diphosphate sugar epimerases.
 
   
 0.953
AJE_03466
Hypothetical protein.
       0.754
AJE_03471
Hypothetical protein; COG1020 Non-ribosomal peptide synthetase modules and related proteins.
       0.745
AJE_03476
Short-chain dehydrogenase/reductase SDR; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
       0.734
AJE_03481
Methyltransferase FkbM family protein; COG0500 SAM-dependent methyltransferases.
       0.628
AJE_02401
DegT/DnrJ/EryC1/StrS aminotransferase; COG0399 Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.588
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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