Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 annotation | node2 annotation | score |
| AJE_03521 | AJE_03531 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.642 |
| AJE_03521 | AJE_03536 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | COG2604 Uncharacterized protein conserved in bacteria. | 0.682 |
| AJE_03521 | AJE_03541 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | Hypothetical protein. | 0.578 |
| AJE_03521 | AJE_03546 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS. | 0.579 |
| AJE_03521 | AJE_03551 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.571 |
| AJE_03521 | AJE_03556 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | COG1334 Uncharacterized flagellar protein FlaG. | 0.530 |
| AJE_03521 | AJE_03561 | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | Flagellin domain-containing protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.408 |
| AJE_03531 | AJE_03521 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | 0.642 |
| AJE_03531 | AJE_03536 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | COG2604 Uncharacterized protein conserved in bacteria. | 0.752 |
| AJE_03531 | AJE_03541 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Hypothetical protein. | 0.711 |
| AJE_03531 | AJE_03546 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS. | 0.711 |
| AJE_03531 | AJE_03551 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.706 |
| AJE_03531 | AJE_03556 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | COG1334 Uncharacterized flagellar protein FlaG. | 0.650 |
| AJE_03531 | AJE_03561 | COG0463 Glycosyltransferases involved in cell wall biogenesis. | Flagellin domain-containing protein; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella. | 0.491 |
| AJE_03536 | AJE_03521 | COG2604 Uncharacterized protein conserved in bacteria. | Hypothetical protein; COG5610 Predicted hydrolase (HAD superfamily). | 0.682 |
| AJE_03536 | AJE_03531 | COG2604 Uncharacterized protein conserved in bacteria. | COG0463 Glycosyltransferases involved in cell wall biogenesis. | 0.752 |
| AJE_03536 | AJE_03541 | COG2604 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.732 |
| AJE_03536 | AJE_03546 | COG2604 Uncharacterized protein conserved in bacteria. | Flagellar protein FliS; COG1516 Flagellin-specific chaperone FliS. | 0.761 |
| AJE_03536 | AJE_03551 | COG2604 Uncharacterized protein conserved in bacteria. | Flagellar capping protein; Required for morphogenesis and for the elongation of the flagellar filament by facilitating polymerization of the flagellin monomers at the tip of growing filament. Forms a capping structure, which prevents flagellin subunits (transported through the central channel of the flagellum) from leaking out without polymerization at the distal end. | 0.846 |
| AJE_03536 | AJE_03556 | COG2604 Uncharacterized protein conserved in bacteria. | COG1334 Uncharacterized flagellar protein FlaG. | 0.791 |
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