STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_05891Hypothetical protein; COG4942 Membrane-bound metallopeptidase. (379 aa)    
Predicted Functional Partners:
AJE_05906
Cell division protein; Part of the ABC transporter FtsEX involved in cellular division; Belongs to the ABC-4 integral membrane protein family. FtsX subfamily.
 
 
 
 0.971
AJE_05896
COG2861 Uncharacterized protein conserved in bacteria.
   
 0.840
AJE_12793
COG0860 N-acetylmuramoyl-L-alanine amidase.
 
  
 0.824
gpmI
Phosphoglyceromutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
       0.806
AJE_07331
Peptidase M23B; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.751
AJE_13571
Peptidase M23; COG0739 Membrane proteins related to metalloendopeptidases.
 
   
 0.748
AJE_13200
COG0642 Signal transduction histidine kinase.
    
 0.693
AJE_13365
Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase.
    
  0.684
AJE_17595
Protease; Functions as both a chaperone and a metalloprotease. Maintains the integrity of the outer membrane by promoting either the assembly or the elimination of outer membrane proteins, depending on their folding state.
 
 
   0.678
AJE_03071
Hypothetical protein; COG0457 FOG: TPR repeat.
  
 
 0.667
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.