STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_07056Chloromuconate cycloisomerase; COG4948 L-alanine-DL-glutamate epimerase and related enzymes of enolase superfamily. (364 aa)    
Predicted Functional Partners:
AJE_07061
NLP/P60 protein; COG0791 Cell wall-associated hydrolases (invasion-associated proteins).
 
  
 0.942
AJE_02586
Catechol 1,2-dioxygenase; COG3485 Protocatechuate 3,4-dioxygenase beta subunit.
  
 
 0.900
AJE_02591
COG4829 Muconolactone delta-isomerase.
  
 
 0.900
AJE_05336
COG0412 Dienelactone hydrolase and related enzymes.
   
 
  0.679
AJE_05396
Peptidase U61; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
 
  
 0.609
AJE_04856
COG0246 Mannitol-1-phosphate/altronate dehydrogenases.
    
 0.586
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta-semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy-tetrahydrodipicolinate (HTPA).
    
 0.586
AJE_11249
BadF/BadG/BcrA/BcrD type ATPase; COG2971 Predicted N-acetylglucosamine kinase.
 
    0.553
AJE_00595
COG0469 Pyruvate kinase; Belongs to the pyruvate kinase family.
     
 0.531
AJE_15434
PfkB domain-containing protein; COG0524 Sugar kinases, ribokinase family.
 
  
 0.523
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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