STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_07116Putative two-component system sensor kinase. (393 aa)    
Predicted Functional Partners:
AJE_04270
Aerobic respiration control sensor protein ArcB; COG0642 Signal transduction histidine kinase.
  
 0.999
AJE_10999
Hpt sensor hybrid histidine kinase; COG2198 FOG: HPt domain.
  
 0.999
AJE_12950
Multi-sensor hybrid histidine kinase; COG0784 FOG: CheY-like receiver.
  
 0.999
AJE_13200
COG0642 Signal transduction histidine kinase.
 
 0.999
AJE_13365
Hybrid sensory histidine kinase BarA; COG0642 Signal transduction histidine kinase.
  
 0.999
AJE_13724
Sensory box histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.999
AJE_06071
Sensor protein; COG0591 Na+/proline symporter.
  
 0.996
AJE_16914
Sensory box histidine kinase/response regulator; COG0591 Na+/proline symporter.
  
 0.996
AJE_14495
Multi-sensor hybrid histidine kinase.
  
 0.980
AJE_10428
Multi-sensor signal transduction histidine kinase; COG3452 Predicted periplasmic ligand-binding sensor domain.
   
 0.962
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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