STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_07196Hypothetical protein. (168 aa)    
Predicted Functional Partners:
AJE_11959
Diguanylate cyclase; COG0457 FOG: TPR repeat.
  
     0.718
AJE_07201
Oligopeptidase A; COG0339 Zn-dependent oligopeptidases.
       0.675
AJE_02051
COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance.
  
     0.669
AJE_06231
COG3105 Uncharacterized protein conserved in bacteria.
  
     0.641
AJE_17630
Lipoprotein-34 NlpB; COG3317 Uncharacterized lipoprotein.
  
     0.641
AJE_02671
Metallo-beta-lactamase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
  
     0.625
AJE_04300
COG4242 Cyanophycinase and related exopeptidases.
  
     0.624
AJE_13315
Anti sigma-E protein RseA domain-containing protein; An anti-sigma factor for extracytoplasmic function (ECF) sigma factor sigma-E (RpoE). ECF sigma factors are held in an inactive form by an anti-sigma factor until released by regulated intramembrane proteolysis (RIP). RIP occurs when an extracytoplasmic signal triggers a concerted proteolytic cascade to transmit information and elicit cellular responses. The membrane-spanning regulatory substrate protein is first cut periplasmically (site-1 protease, S1P, DegS), then within the membrane itself (site-2 protease, S2P, RseP), while cyto [...]
  
     0.624
AJE_17710
Hypothetical protein; COG3083 Predicted hydrolase of alkaline phosphatase superfamily.
  
     0.618
AJE_08345
COG1585 Membrane protein implicated in regulation of membrane protease activity.
  
     0.617
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.