STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_08105COG1629 Outer membrane receptor proteins, mostly Fe transport. (862 aa)    
Predicted Functional Partners:
AJE_03111
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
 
  0.644
AJE_14150
COG0500 SAM-dependent methyltransferases.
  
     0.569
AJE_01484
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.554
AJE_03906
Aminopeptidase; COG2234 Predicted aminopeptidases.
  
     0.553
AJE_05601
Hypothetical protein; COG4798 Predicted methyltransferase.
  
     0.532
AJE_00904
TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.524
AJE_06426
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.477
AJE_08100
COG2020 Putative protein-S-isoprenylcysteine methyltransferase.
       0.468
AJE_14715
COG4805 Uncharacterized protein conserved in bacteria.
  
     0.455
AJE_11419
TonB family protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
  
  0.449
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.