STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_08517N-6 DNA methylase; COG0286 Type I restriction-modification system methyltransferase subunit. (728 aa)    
Predicted Functional Partners:
AJE_08522
COG0732 Restriction endonuclease S subunits.
 
 0.976
AJE_08537
COG0610 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
 
 
 0.976
AJE_06546
Type I restriction-modification system specificity; COG0732 Restriction endonuclease S subunits.
  
 
 0.809
AJE_00440
Restriction modification system DNA specificity subunit; COG0732 Restriction endonuclease S subunits.
 
 
 0.797
AJE_02111
EcoKI restriction-modification system protein HsdS; COG0732 Restriction endonuclease S subunits.
 
 
 0.746
AJE_02106
Restriction modification system DNA specificity domain-containing protein; COG0732 Restriction endonuclease S subunits; overlaps another CDS with the same product name.
  
   0.669
AJE_10448
COG0732 Restriction endonuclease S subunits.
  
   0.669
AJE_02101
Restriction modification system DNA specificity domain-containing protein; COG0732 Restriction endonuclease S subunits; overlaps another CDS with the same product name.
  
   0.662
AJE_08512
Sodium/hydrogen exchanger; COG0475 Kef-type K+ transport systems, membrane components.
 
     0.535
AJE_00425
DEAD/DEAH box helicase; COG4096 Type I site-specific restriction-modification system, R (restriction) subunit and related helicases.
  
 
 0.477
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.