STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_09354COG1629 Outer membrane receptor proteins, mostly Fe transport. (832 aa)    
Predicted Functional Partners:
AJE_00904
TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.765
AJE_09519
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.694
AJE_15464
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  
 0.621
AJE_06096
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.602
AJE_03111
TonB family protein; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy-requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins. Belongs to the TonB family.
  
  0.554
AJE_07895
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
  0.515
AJE_04911
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.514
AJE_09359
COG0626 Cystathionine beta-lyases/cystathionine gamma-synthases.
       0.506
AJE_10769
Hypothetical protein.
  
     0.496
AJE_10749
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 
 0.477
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.