STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_09429COG3436 Transposase and inactivated derivatives. (258 aa)    
Predicted Functional Partners:
AJE_09424
COG3436 Transposase and inactivated derivatives.
     0.994
AJE_06626
COG3436 Transposase and inactivated derivatives.
 
     0.976
AJE_09419
COG3436 Transposase and inactivated derivatives.
 
     0.884
AJE_06621
COG3436 Transposase and inactivated derivatives.
 
     0.761
AJE_05491
COG3436 Transposase and inactivated derivatives.
 
     0.760
AJE_00894
COG3436 Transposase and inactivated derivatives.
  
     0.755
AJE_00455
Hypothetical protein; COG3436 Transposase and inactivated derivatives.
     0.722
AJE_03036
Hypothetical protein; COG3436 Transposase and inactivated derivatives.
     0.722
AJE_08080
Hypothetical protein; COG3436 Transposase and inactivated derivatives.
     0.722
AJE_09414
Hypothetical protein.
       0.536
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.