STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_100344Fe-4S ferredoxin; Ferredoxins are iron-sulfur proteins that transfer electrons in a wide variety of metabolic reactions. (107 aa)    
Predicted Functional Partners:
AJE_01976
Isocitrate dehydrogenase, NADP-dependent; COG2838 Monomeric isocitrate dehydrogenase; Belongs to the monomeric-type IDH family.
  
 
 0.927
gltB
COG0067 Glutamate synthase domain 1.
    
  0.921
mdh
Malate dehydrogenase; Catalyzes the reversible oxidation of malate to oxaloacetate.
  
 
 0.901
AJE_01064
NADH:flavin oxidoreductase/NADH oxidase; COG1902 NADH:flavin oxidoreductases, Old Yellow Enzyme family.
  
 0.829
AJE_13561
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
   
 
  0.775
gltD
COG0493 NADPH-dependent glutamate synthase beta chain and related oxidoreductases.
  
 0.764
AJE_11194
Oxoisovalerate dehydrogenase subunits alpha/beta; COG1071 Pyruvate/2-oxoglutarate dehydrogenase complex, dehydrogenase (E1) component, eukaryotic type, alpha subunit.
     
 0.747
AJE_00919
FAD linked oxidase-like protein; COG0277 FAD/FMN-containing dehydrogenases.
  
 
  0.723
AJE_04836
FAD binding domain/FAD linked oxidase domain/4Fe-4S binding domain-containing protein; COG0277 FAD/FMN-containing dehydrogenases.
  
 
  0.723
AJE_02671
Metallo-beta-lactamase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
    
 0.702
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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