STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_10754COG1609 Transcriptional regulators. (387 aa)    
Predicted Functional Partners:
AJE_17745
PTS system glucose subfamily transporter subunit IIA; COG2190 Phosphotransferase system IIA components.
    
 0.898
gltB
COG0067 Glutamate synthase domain 1.
    
 
 0.889
AJE_10749
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.777
AJE_06331
COG1925 Phosphotransferase system, HPr-related proteins.
   
 
 0.771
AJE_08757
Glycoside hydrolase, family 3; COG1472 Beta-glucosidase-related glycosidases.
 
  
  0.665
AJE_07815
COG1501 Alpha-glucosidases, family 31 of glycosyl hydrolases; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.658
AJE_15464
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.621
AJE_07810
Alpha-amylase; COG0366 Glycosidases; Belongs to the glycosyl hydrolase 13 family.
 
 
  0.577
AJE_07895
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
     0.551
AJE_07785
Alpha-amylase; COG0366 Glycosidases.
 
 
  0.536
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.