STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_11519COG1396 Predicted transcriptional regulators. (502 aa)    
Predicted Functional Partners:
AJE_16844
Cytidyltransferase; COG1056 Nicotinamide mononucleotide adenylyltransferase.
  
 
  0.775
AJE_11514
COG2225 Malate synthase.
 
     0.745
AJE_11524
Hypothetical protein.
       0.709
AJE_02466
Lipopolysaccharide biosynthesis protein.
  
     0.677
AJE_08657
Hypothetical protein.
 
     0.620
AJE_11679
Hypothetical protein; COG0457 FOG: TPR repeat.
 
  
 0.535
AJE_16464
Hypothetical protein.
  
     0.528
AJE_10684
Toxin; COG3550 Uncharacterized protein related to capsule biosynthesis enzymes.
 
   0.518
AJE_02051
COG3015 Uncharacterized lipoprotein NlpE involved in copper resistance.
  
     0.516
AJE_06806
COG4185 Uncharacterized protein conserved in bacteria.
    
 
 0.510
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.