STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phhBCOG2154 Pterin-4a-carbinolamine dehydratase. (113 aa)    
Predicted Functional Partners:
phhA
COG3186 Phenylalanine-4-hydroxylase.
 
 0.989
AJE_14475
COG3185 4-hydroxyphenylpyruvate dioxygenase and related hemolysins.
  
  
 0.829
AJE_14480
COG3508 Homogentisate 1,2-dioxygenase.
  
  
 0.751
AJE_03886
COG1448 Aspartate/tyrosine/aromatic aminotransferase.
  
  
 0.623
AJE_14470
Transcriptional regulatory protein tyrR; COG3283 Transcriptional regulator of aromatic amino acids metabolism.
     
 0.589
AJE_05331
COG0778 Nitroreductase.
   
 
  0.570
AJE_14490
Maleylacetoacetate isomerase; COG0625 Glutathione S-transferase.
  
  
 0.534
AJE_11344
Short-chain dehydrogenase/reductase SDR; COG4221 Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
  0.500
AJE_03081
UBA/THIF-type NAD/FAD binding protein; COG0476 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2.
  
 
  0.498
AJE_01049
COG0778 Nitroreductase.
   
 
  0.496
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.