STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_15194Hypothetical protein; COG0346 Lactoylglutathione lyase and related lyases. (134 aa)    
Predicted Functional Partners:
AJE_02671
Metallo-beta-lactamase; COG1104 Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes.
   
 0.741
AJE_13561
COG5016 Pyruvate/oxaloacetate carboxyltransferase.
    
 0.729
trpC
Bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase; COG0134 Indole-3-glycerol phosphate synthase; Belongs to the TrpC family.
    
 0.721
AJE_11174
Iron-sulfur cluster-binding protein; COG1145 Ferredoxin.
  
 
 0.700
argA
N-acetylglutamate synthase; COG0548 Acetylglutamate kinase; Belongs to the acetyltransferase family. ArgA subfamily.
    
  0.654
AJE_15189
Hypothetical protein; COG1670 Acetyltransferases, including N-acetylases of ribosomal proteins.
       0.643
AJE_16799
Succinate dehydrogenase, hydrophobic subunit, cytochrome b556 with sdhD; COG2009 Succinate dehydrogenase/fumarate reductase, cytochrome b subunit.
   
    0.639
AJE_16399
COG4799 Acetyl-CoA carboxylase, carboxyltransferase component (subunits alpha and beta).
  
 
 0.608
AJE_05396
Peptidase U61; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF.
 
  
  0.564
AJE_09504
Flavin reductase FMN-binding protein; COG1853 Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family.
  
 
 0.550
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.