STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_15659Hypothetical protein; COG1175 ABC-type sugar transport systems, permease components. (255 aa)    
Predicted Functional Partners:
purN
Phosphoribosylglycinamide formyltransferase; Catalyzes the transfer of a formyl group from 10- formyltetrahydrofolate to 5-phospho-ribosyl-glycinamide (GAR), producing 5-phospho-ribosyl-N-formylglycinamide (FGAR) and tetrahydrofolate.
    
  0.818
AJE_14280
COG3170 Tfp pilus assembly protein FimV.
 
 
 0.804
purM
COG0150 Phosphoribosylaminoimidazole (AIR) synthetase.
       0.797
AJE_01636
Cell division protein FtsK; COG1674 DNA segregation ATPase FtsK/SpoIIIE and related proteins.
    
 
 0.718
AJE_11289
Regulatory protein AmpE; COG3725 Membrane protein required for beta-lactamase induction.
  
     0.677
zipA
Cell division protein ZipA; Essential cell division protein that stabilizes the FtsZ protofilaments by cross-linking them and that serves as a cytoplasmic membrane anchor for the Z ring. Also required for the recruitment to the septal ring of downstream cell division proteins.
  
     0.648
AJE_12945
Hypothetical protein.
  
    0.644
AJE_09864
COG1404 Subtilisin-like serine proteases; Belongs to the peptidase S8 family.
 
 
  0.609
AJE_12743
Hypothetical protein.
  
     0.608
AJE_04871
Glycoside hydrolase family 28 domain-containing protein; COG5434 Endopolygalacturonase; Belongs to the glycosyl hydrolase 28 family.
 
 
 0.600
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.