STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_15934Hypothetical protein. (209 aa)    
Predicted Functional Partners:
AJE_15954
Prophage MuSo1, DNA transposition protein; COG2842 Uncharacterized ATPase, putative transposase.
 
    0.936
AJE_15959
Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives.
 
    0.920
AJE_15964
COG3423 Predicted transcriptional regulator.
 
     0.920
AJE_15914
COG4382 Mu-like prophage protein gp16.
 
    0.903
AJE_15849
COG4383 Mu-like prophage protein gp29.
 
     0.847
AJE_15844
COG2369 Uncharacterized protein, homolog of phage Mu protein gp30.
 
     0.846
AJE_15854
COG4373 Mu-like prophage FluMu protein gp28.
 
     0.844
AJE_15864
Hypothetical protein.
 
     0.843
AJE_15839
COG5005 Mu-like prophage protein gpG.
 
     0.827
AJE_15829
COG4388 Mu-like prophage I protein.
 
     0.813
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.