STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_15949Hypothetical protein. (197 aa)    
Predicted Functional Partners:
AJE_15944
Hypothetical protein.
  
    0.808
AJE_15939
Hypothetical protein.
       0.773
AJE_15934
Hypothetical protein.
  
    0.772
AJE_15924
HU, DNA-binding transcriptional regulator subunit beta; COG0776 Bacterial nucleoid DNA-binding protein; Belongs to the bacterial histone-like protein family.
       0.752
AJE_15929
Hypothetical protein.
       0.752
AJE_15959
Integrase catalytic subunit; COG2801 Transposase and inactivated derivatives.
  
    0.743
AJE_15954
Prophage MuSo1, DNA transposition protein; COG2842 Uncharacterized ATPase, putative transposase.
  
    0.729
AJE_15964
COG3423 Predicted transcriptional regulator.
       0.705
AJE_15914
COG4382 Mu-like prophage protein gp16.
  
    0.562
AJE_15904
Mu-like phage C protein, positive regulator of late transcription.
       0.560
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
Server load: low (24%) [HD]