STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_16164Two-component system sensor protein; COG4585 Signal transduction histidine kinase. (380 aa)    
Predicted Functional Partners:
AJE_16169
Two-component system regulatory protein; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.986
AJE_08712
Two component LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.942
AJE_11109
Transcriptional regulator NarL; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.939
AJE_14595
Hypothetical protein; COG3292 Predicted periplasmic ligand-binding sensor domain.
  
 0.936
AJE_01586
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.931
AJE_06091
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.895
AJE_13200
COG0642 Signal transduction histidine kinase.
  
 0.893
AJE_16919
LuxR family transcriptional regulator; COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.888
AJE_14495
Multi-sensor hybrid histidine kinase.
   
 0.864
AJE_00964
COG2197 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain.
 
 0.858
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.