STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE_17215COG0810 Periplasmic protein TonB, links inner and outer membranes. (142 aa)    
Predicted Functional Partners:
AJE_07895
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
 0.973
AJE_03116
COG0848 Biopolymer transport protein.
  
 0.865
tolR
Biopolymer transport protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.865
AJE_03121
MotA/TolQ/ExbB proton channel; COG0811 Biopolymer transport proteins.
 
 0.809
AJE_03126
MotA/TolQ/ExbB proton channel protein; COG0811 Biopolymer transport proteins.
  
 0.774
tolQ
tolQ protein; Part of the Tol-Pal system, which plays a role in outer membrane invagination during cell division and is important for maintaining outer membrane integrity.
  
 0.774
AJE_12843
Polar flagellar protein; COG0790 FOG: TPR repeat, SEL1 subfamily.
 
     0.673
metH
COG0646 Methionine synthase I (cobalamin-dependent), methyltransferase domain; overlaps another CDS with the same product name.
    
  0.668
AJE_00904
TonB-dependent receptor plug; COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  0.665
AJE_06096
COG1629 Outer membrane receptor proteins, mostly Fe transport.
  
  0.665
Your Current Organism:
Alishewanella jeotgali
NCBI taxonomy Id: 1129374
Other names: A. jeotgali KCTC 22429, Alishewanella jeotgali KCTC 22429, Alishewanella jeotgali MS1, Alishewanella jeotgali str. KCTC 22429, Alishewanella jeotgali strain KCTC 22429, Alishewanella sp. MS1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.