STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GPLA_2865Multidrug resistance protein, AcrB/AcrD/AcrF; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family. (1019 aa)    
Predicted Functional Partners:
GPLA_2863
Hypothetical protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.970
GPLA_4418
RND family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
 
  0.792
GPLA_2864
Hypothetical protein.
       0.773
GPLA_3280
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.681
GPLA_0721
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.637
GPLA_3286
AcrA/E family efflux transporter MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.623
GPLA_4376
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.603
GPLA_0720
Membrane-fusion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.595
GPLA_1693
HlyD family secretion protein; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  0.593
mdtE
Multidrug resistance protein mdtE; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
   
  0.576
Your Current Organism:
Paraglaciecola polaris
NCBI taxonomy Id: 1129793
Other names: Glaciecola polaris LMG 21857, Glaciecola polaris str. LMG 21857, Glaciecola polaris strain LMG 21857, P. polaris LMG 21857, Paraglaciecola polaris LMG 21857
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