STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C427_0995acyl-CoA dehydrogenase. (586 aa)    
Predicted Functional Partners:
C427_1827
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.876
fadJ
Multifunctional fatty acid oxidation complex subunit alpha; Catalyzes the formation of a hydroxyacyl-CoA by addition of water on enoyl-CoA. Also exhibits 3-hydroxyacyl-CoA epimerase and 3- hydroxyacyl-CoA dehydrogenase activities. Belongs to the enoyl-CoA hydratase/isomerase family. In the central section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family.
  
 0.876
C427_5357
Fatty acid oxidation complex subunit FadB; Belongs to the enoyl-CoA hydratase/isomerase family.
 
 0.799
fadB
Multifunctional fatty acid oxidation complex subunit alpha.
 
 0.798
C427_2984
Electron transfer flavoprotein subunit alpha/beta.
 
 
 0.768
fadN
Fatty oxidation complex subunit alpha; Belongs to the enoyl-CoA hydratase/isomerase family.
  
 0.763
C427_0300
Hypothetical protein.
  
  0.748
C427_2985
Electron transfer flavoprotein subunit beta.
 
 
 0.726
C427_1828
acetyl-CoA acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family.
  
  0.688
fadI
3-ketoacyl-CoA thiolase; Catalyzes the final step of fatty acid oxidation in which acetyl-CoA is released and the CoA ester of a fatty acid two carbons shorter is formed.
  
  0.688
Your Current Organism:
Paraglaciecola psychrophila
NCBI taxonomy Id: 1129794
Other names: Glaciecola psychrophila 170, Glaciecola psychrophila str. 170, Glaciecola psychrophila strain 170, P. psychrophila 170, Paraglaciecola psychrophila 170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.