STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C427_5308Hypothetical protein. (97 aa)    
Predicted Functional Partners:
C427_5310
Type II secretion system protein E.
     
 0.787
C427_5311
Type II secretion system F domain-containing protein.
       0.786
C427_5312
Hypothetical protein.
       0.784
C427_5309
Hypothetical protein.
       0.773
C427_5305
Pilus (MSHA type) biogenesis protein MshL.
  
  
 0.609
C427_5313
Prepilin-type cleavage/methylation protein.
  
    0.587
C427_5302
Hypothetical protein.
     
 0.570
C427_5306
MSHA biogenesis protein MshM.
       0.552
htpG
Heat shock protein 90; Molecular chaperone. Has ATPase activity.
   
 0.542
C427_5301
Hypothetical protein.
       0.534
Your Current Organism:
Paraglaciecola psychrophila
NCBI taxonomy Id: 1129794
Other names: Glaciecola psychrophila 170, Glaciecola psychrophila str. 170, Glaciecola psychrophila strain 170, P. psychrophila 170, Paraglaciecola psychrophila 170
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.