STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJT49732.1Alkaline phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology. (710 aa)    
Predicted Functional Partners:
AJT49791.1
Glycerol phosphate lipoteichoic acid synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
0.907
AJT51492.1
DNA methyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.637
AJT50379.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0346 family.
  
     0.624
AJT50717.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    0.570
AJT49941.1
Lipid kinase; Similar to YegS from E. coli; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.564
AJT49733.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.495
AJT50174.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.492
AJT49731.1
NAD(P)H nitroreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.483
AJT50082.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.468
AJT49730.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the UPF0145 family.
       0.466
Your Current Organism:
Lactobacillus mucosae
NCBI taxonomy Id: 1130798
Other names: L. mucosae LM1, Lactobacillus mucosae LM1, Lactobacillus mucosae str. LM1, Lactobacillus mucosae strain LM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.