STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJT50142.1Phage major structural protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (130 aa)    
Predicted Functional Partners:
AJT50143.1
Phage tail protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.785
AJT50140.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.763
AJT50139.1
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
AJT50144.1
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.762
AJT50141.1
Phage protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.746
AJT50138.1
Head protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.716
AJT51420.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.619
Your Current Organism:
Lactobacillus mucosae
NCBI taxonomy Id: 1130798
Other names: L. mucosae LM1, Lactobacillus mucosae LM1, Lactobacillus mucosae str. LM1, Lactobacillus mucosae strain LM1
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.