STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJT50977.1Zinc protease; Derived by automated computational analysis using gene prediction method: Protein Homology. (432 aa)    
Predicted Functional Partners:
AJT51495.1
Peptidase M16; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.984
AJT50976.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.741
AJT50975.1
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the CDP-alcohol phosphatidyltransferase class-I family.
     
 0.725
atpH
ATP synthase F0F1 subunit delta; F(1)F(0) ATP synthase produces ATP from ADP in the presence of a proton or sodium gradient. F-type ATPases consist of two structural domains, F(1) containing the extramembraneous catalytic core and F(0) containing the membrane proton channel, linked together by a central stalk and a peripheral stalk. During catalysis, ATP synthesis in the catalytic domain of F(1) is coupled via a rotary mechanism of the central stalk subunits to proton translocation.
   
 
 0.693
AJT49701.1
Saccharopine dehydrogenase related protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.684
AJT50505.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.684
AJT50786.1
Nucleoside-diphosphate-sugar epimerase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.684
AJT49880.1
Deoxyadenosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.656
AJT50053.1
Deoxyguanosine kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 
 0.656
acpP
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
   
 
 0.649
Your Current Organism:
Lactobacillus mucosae
NCBI taxonomy Id: 1130798
Other names: L. mucosae LM1, Lactobacillus mucosae LM1, Lactobacillus mucosae str. LM1, Lactobacillus mucosae strain LM1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.