STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_00040Unannotated protein. (280 aa)    
Predicted Functional Partners:
GCA_000379225_00039
Unannotated protein.
  
    0.880
GCA_000379225_01786
Unannotated protein.
  
 
 0.862
GCA_000379225_00038
Unannotated protein.
 
    0.860
GCA_000379225_00037
Unannotated protein.
       0.800
GCA_000379225_01142
Unannotated protein.
    
  0.709
GCA_000379225_01376
Unannotated protein.
    
  0.630
GCA_000379225_01667
Unannotated protein.
    
 0.620
GCA_000379225_00203
Unannotated protein.
    
  0.572
GCA_000379225_00036
Unannotated protein.
       0.528
GCA_000379225_01008
Unannotated protein.
   
    0.497
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.