STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_00189Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_000379225_00192
Unannotated protein.
 
     0.860
GCA_000379225_00187
Unannotated protein.
      0.807
GCA_000379225_00188
Unannotated protein.
 
     0.794
GCA_000379225_00190
Unannotated protein.
 
     0.785
GCA_000379225_00193
Unannotated protein.
 
     0.713
GCA_000379225_00191
Unannotated protein.
       0.635
GCA_000379225_00182
Unannotated protein.
       0.591
GCA_000379225_00183
Unannotated protein.
       0.590
GCA_000379225_00184
Unannotated protein.
       0.587
GCA_000379225_00185
Unannotated protein.
       0.587
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.