STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_00672Unannotated protein. (134 aa)    
Predicted Functional Partners:
GCA_000379225_00671
Unannotated protein.
 
 0.994
GCA_000379225_01966
Unannotated protein.
 
 0.974
GCA_000379225_00950
Unannotated protein.
 
 0.906
GCA_000379225_01964
Unannotated protein.
  
 0.890
GCA_000379225_00414
Unannotated protein.
  
 0.851
GCA_000379225_01585
Unannotated protein.
 
 
 0.709
GCA_000379225_01126
Unannotated protein.
 
 
 0.691
GCA_000379225_02244
Unannotated protein.
  
 
  0.648
GCA_000379225_01048
Unannotated protein.
  
     0.618
GCA_000379225_00990
Unannotated protein.
  
     0.537
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.