STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_00864Unannotated protein. (437 aa)    
Predicted Functional Partners:
GCA_000379225_01516
Unannotated protein.
     
 0.736
GCA_000379225_00001
Unannotated protein.
    
  0.658
GCA_000379225_00502
Unannotated protein.
    
  0.658
GCA_000379225_01871
Unannotated protein.
  
 
  0.644
GCA_000379225_02242
Unannotated protein.
  
  
 0.560
GCA_000379225_01739
Unannotated protein.
  
  
 0.532
GCA_000379225_00162
Unannotated protein.
     
 0.520
GCA_000379225_00450
Unannotated protein.
 
    0.516
GCA_000379225_01743
Unannotated protein.
     
 0.499
GCA_000379225_01923
Unannotated protein.
      
 0.495
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.