STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_00929Unannotated protein. (784 aa)    
Predicted Functional Partners:
GCA_000379225_00928
Unannotated protein.
 
 0.999
GCA_000379225_00403
Unannotated protein.
  
  
 0.994
GCA_000379225_00066
Unannotated protein.
  
  
 0.989
GCA_000379225_00977
Unannotated protein.
  
 
 0.986
GCA_000379225_00365
Unannotated protein.
  
 
 0.982
GCA_000379225_00079
Unannotated protein.
 
  
 0.973
GCA_000379225_01719
Unannotated protein.
  
  
 0.965
GCA_000379225_01102
Unannotated protein.
  
 
 0.963
GCA_000379225_01786
Unannotated protein.
  
 
 0.960
GCA_000379225_00062
Unannotated protein.
    
 
 0.955
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
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