STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000379225_01796Unannotated protein. (602 aa)    
Predicted Functional Partners:
GCA_000379225_00773
Unannotated protein.
 0.999
GCA_000379225_00664
Unannotated protein.
 
 0.981
GCA_000379225_01271
Unannotated protein.
 
 
 0.921
GCA_000379225_02147
Unannotated protein.
  
  
 0.910
GCA_000379225_00122
Unannotated protein.
  
 
 0.811
GCA_000379225_00121
Unannotated protein.
     
 0.799
GCA_000379225_00291
Unannotated protein.
     
 0.799
GCA_000379225_01795
Unannotated protein.
       0.773
GCA_000379225_01797
Unannotated protein.
       0.773
GCA_000379225_00553
Unannotated protein.
    
 0.755
Your Current Organism:
zeta proteobacterium
NCBI taxonomy Id: 1131284
Other names: z. proteobacterium SCGC AB-137-C09, zeta proteobacterium SCGC AB-137-C09
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.