STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05157.1Radical SAM domain protein. (375 aa)    
Predicted Functional Partners:
AFV05155.1
Hypothetical protein.
 
     0.796
AFV05158.1
Hypothetical protein.
       0.777
AFV04240.1
Tungsten-containing aldehyde ferredoxin oxidoreductase cofactor-modifying protein.
  
     0.733
AFV06429.1
Radical SAM domain protein.
  
     0.708
AFV04199.1
Radical SAM domain protein.
  
     0.702
AFV04195.1
Radical SAM domain protein.
  
     0.687
AFV05123.1
Coenzyme PQQ synthesis protein D (PqqD).
 
     0.629
AFV05154.1
Hypothetical protein.
 
     0.629
AFV05121.1
Hypothetical protein.
  
     0.589
AFV05156.1
Hypothetical protein.
       0.578
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.