STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05234.1Putative transcriptional regulator of N-Acetylglucosamine utilization, GntR family. (241 aa)    
Predicted Functional Partners:
AFV05235.1
Putative cobalamin binding protein.
       0.773
AFV05063.1
Lactate-responsive regulator LldR in Firmicutes, GntR family.
  
    0.638
AFV06749.1
Transcriptional regulator.
  
    0.628
AFV04424.1
Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.626
AFV06364.1
Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.623
AFV05209.1
Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.620
AFV05233.1
Cobalamin synthesis protein, P47K.
 
     0.580
AFV05231.1
Uroporphyrinogen-III decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
     0.525
AFV06027.1
Hypothetical protein.
 
     0.499
AFV05269.1
Hypothetical protein.
 
     0.446
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.