STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05352.1FIG00713690: hypothetical protein. (77 aa)    
Predicted Functional Partners:
AFV05349.1
FIG00516547: hypothetical protein.
       0.825
AFV05346.1
FIG00519432: hypothetical protein.
       0.809
AFV05347.1
Hypothetical protein.
       0.809
AFV05350.1
Flp pilus assembly protein CpaB.
       0.809
AFV05351.1
Type IV leader peptidase family.
       0.809
AFV05348.1
Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA subfamily.
       0.788
AFV05344.1
FIG00775012: hypothetical protein.
       0.578
AFV05343.1
Hypothetical protein.
       0.564
AFV05353.1
FIG00713986: hypothetical protein; Belongs to the SpoVG family.
       0.542
AFV05345.1
Hypothetical protein.
       0.515
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.