STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05364.1Hypothetical protein. (392 aa)    
Predicted Functional Partners:
AFV05357.1
FIG00514213: hypothetical protein.
 
     0.754
AFV05362.1
Site-specific DNA methylase.
     0.744
AFV05367.1
FIG00524081: hypothetical protein.
 
     0.724
DCF50_p31
Hypothetical protein.
  
     0.721
AFV05365.1
Hypothetical protein.
       0.701
AFV05327.1
TraE-like protein.
 
    0.691
DCF50_p30
FIG00514444: hypothetical protein.
 
    0.688
DCF50_p23
Hypothetical protein.
 
     0.668
DCF50_p28
TrsE-like protein.
 
    0.664
AFV06479.1
Hypothetical protein.
  
     0.637
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.