STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05758.1HesA/MoeB/ThiF family protein related to EC-YgdL. (255 aa)    
Predicted Functional Partners:
AFV05759.1
Heavy-metal binding protein (similar to N-terminal domain of MerA).
       0.774
tpiA
Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family.
 
    
 0.754
AFV05760.1
P-type Cu+ transporter; ATPase, E1-E2 type:Copper ion-binding:Copper-translocating P-type ATPase:Heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase:Heavy metal translocating P-type ATPase.
       0.686
AFV05761.1
Hypothetical protein.
       0.562
AFV05757.1
Transcriptional regulator, MarR family protein, putative.
       0.505
AFV04904.1
Putative radical SAM family enzyme, NOT coproporphyrinogen III oxidase, oxygen-independent.
 
    0.424
AFV05756.1
ATP-utilizing enzyme of the PP-loop superfamily.
       0.407
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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