STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05779.1MazG nucleotide pyrophosphohydrolase. (107 aa)    
Predicted Functional Partners:
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy-tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate; Belongs to the DapB family.
  
    0.635
dnaD
DNA replication protein dnaD.
 
    0.551
AFV05777.1
YbbR-like protein.
       0.535
dacA
Diadenylate cyclase; Catalyzes the condensation of 2 ATP molecules into cyclic di- AMP (c-di-AMP), a second messenger used to regulate differing processes in different bacteria.
       0.535
AFV04280.1
Hypothetical protein.
  
     0.454
AFV04574.1
tRNA nucleotidyltransferase, A-adding; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
 
  
 0.448
AFV05776.1
NAD(FAD)-utilizing dehydrogenase.
       0.447
AFV04447.1
Acetyltransferase AcuA, acetyl-CoA synthetase inhibitor.
  
     0.418
AFV05780.1
Hypothetical protein.
       0.402
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.