STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFV05784.1Hypothetical protein. (427 aa)    
Predicted Functional Partners:
AFV05785.1
Hypothetical protein.
     0.994
AFV05783.1
Putative carboxylesterase or lipase.
 
    0.923
AFV06775.1
Long-chain-fatty-acid--CoA ligase; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.885
AFV06025.1
Hypothetical protein.
  
     0.616
AFV04812.1
Hypothetical protein.
  
     0.437
AFV06519.1
Hypothetical protein.
  
     0.418
AFV04261.1
Hypothetical protein.
  
     0.406
Your Current Organism:
Dehalobacter sp. CF
NCBI taxonomy Id: 1131462
Other names: D. sp. CF
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.